Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55600 4-O-Demethylpenclomedine 308.8697 309.8759 —
P55602 24-homo-3alpha,7alpha,16alpha-trihydroxy-5beta-cholan-25-oic acid 422.3005 423.3085 —
P55603 Faleoconitine 689.3183 690.3285 —
P55604 128.9612 129.9688 —
P55605 113.9706 114.9777 —
P55606 134.9623 135.9696 —
P55607 Citranaxanthin 456.3418 457.3495 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G046700 hypothetical protein NA 11
Glyma.06G260500 hypothetical protein NA 11
Glyma.06G283900 hypothetical protein NA 11
Glyma.06G294200 hypothetical protein NA 11
Glyma.07G011000 hypothetical protein NA 11
Glyma.07G012500 hypothetical protein AT1G51720:AT1G51720:Amino acid dehydrogenase family protein 11
Glyma.07G013700 hypothetical protein AT4G29990:AT4G29990:Leucine-rich repeat transmembrane protein kinase protein 11
Glyma.07G079800 hypothetical protein NA 11
Glyma.07G080400 hypothetical protein AT2G42010:PLDBETA1:phospholipase D beta 1 11
Glyma.07G136900 hypothetical protein NA 11