Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P41917 | TMC 2A | 570.2358 | 571.2433 | 228 |
| P06434 | Eupaglehnin F | 400.1272 | 401.1362 | 227 |
| P11873 | 9R-hydroxy-2E,4E-decadienoic acid | 184.1090 | 185.1162 | 227 |
| P37633 | 1-(1,3-Benzothiazol-2-yl)-1-(2,4-dimethylphenyl)ethanol | 283.1071 | 284.1131 | 227 |
| P55372 | Pentaethylene glycol | 238.1414 | 239.1497 | 227 |
| P01910 | 284.5701 | 285.5766 | 226 | |
| P33196 | 10-Deacetyltaxol-7-xyloside | 943.3493 | 944.3610 | 225 |
| P51321 | Aspernigrin B | 456.1702 | 457.1741 | 225 |
| P09334 | 1-(Pentafluorophenyl)propane | 210.0481 | 211.0553 | 224 |
| P10043 | 547.5963 | 548.6029 | 224 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.20G225700 | hypothetical protein | AT1G08790:AT1G08790:1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase epsilon-1, putative (DUF1685) | 12 | |
| Glyma.01G174100 | hypothetical protein | NA | 11 | |
| Glyma.02G044200 | hypothetical protein | AT5G66060:AT5G66060:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 11 | |
| Glyma.02G090100 | hypothetical protein | NA | 11 | |
| Glyma.02G122100 | hypothetical protein | NA | 11 | |
| Glyma.02G143200 | hypothetical protein | AT3G54560:HTA11:histone H2A 11__AT4G13570:HTA4:histone H2A 4 | 11 | |
| Glyma.02G192200 | Purple acid phosphatase 16 | AT3G10150:PAP16:purple acid phosphatase 16 | 11 | |
| Glyma.02G213100 | hypothetical protein | NA | 11 | |
| Glyma.03G034000 | hypothetical protein | NA | 11 | |
| Glyma.03G035600 | hypothetical protein | NA | 11 |