Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G055300 PER1 peroxidase NA 12
Glyma.18G059000 hypothetical protein NA 12
Glyma.18G059100 hypothetical protein NA 12
Glyma.18G059200 hypothetical protein AT5G58530:AT5G58530:Glutaredoxin family protein 12
Glyma.18G059600 hypothetical protein NA 12
Glyma.18G059800 hypothetical protein AT2G30100:AT2G30100:pentatricopeptide (PPR) repeat-containing protein 12
Glyma.18G060700 hypothetical protein AT1G07120:AT1G07120:CHUP1-like protein 12
Glyma.18G060900 hypothetical protein AT2G30040:MAPKKK14:mitogen-activated protein kinase kinase kinase 14 12
Glyma.18G061100 AS1 asparagine synthetase 1 AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 12
Glyma.18G105900 hypothetical protein AT3G58790:GAUT15:galacturonosyltransferase 15 12