Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G055300 PER1 peroxidase NA 12
Glyma.18G059000 hypothetical protein NA 12
Glyma.18G059100 hypothetical protein NA 12
Glyma.18G059200 hypothetical protein AT5G58530:AT5G58530:Glutaredoxin family protein 12
Glyma.18G059600 hypothetical protein NA 12
Glyma.18G059800 hypothetical protein AT2G30100:AT2G30100:pentatricopeptide (PPR) repeat-containing protein 12
Glyma.18G060700 hypothetical protein AT1G07120:AT1G07120:CHUP1-like protein 12
Glyma.18G060900 hypothetical protein AT2G30040:MAPKKK14:mitogen-activated protein kinase kinase kinase 14 12
Glyma.18G061100 AS1 asparagine synthetase 1 AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 12
Glyma.18G105900 hypothetical protein AT3G58790:GAUT15:galacturonosyltransferase 15 12