Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G055300 PER1 peroxidase NA 12
Glyma.18G059000 hypothetical protein NA 12
Glyma.18G059100 hypothetical protein NA 12
Glyma.18G059200 hypothetical protein AT5G58530:AT5G58530:Glutaredoxin family protein 12
Glyma.18G059600 hypothetical protein NA 12
Glyma.18G059800 hypothetical protein AT2G30100:AT2G30100:pentatricopeptide (PPR) repeat-containing protein 12
Glyma.18G060700 hypothetical protein AT1G07120:AT1G07120:CHUP1-like protein 12
Glyma.18G060900 hypothetical protein AT2G30040:MAPKKK14:mitogen-activated protein kinase kinase kinase 14 12
Glyma.18G061100 AS1 asparagine synthetase 1 AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 12
Glyma.18G105900 hypothetical protein AT3G58790:GAUT15:galacturonosyltransferase 15 12