Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G206500 hypothetical protein NA 12
Glyma.14G211300 hypothetical protein AT3G03270:AT3G03270:Adenine nucleotide alpha hydrolases-like superfamily protein 12
Glyma.16G003500 GLYI-22 putative lactoylglutathione lyase NA 12
Glyma.16G053400 hypothetical protein AT3G27000:ARP2:actin related protein 2 12
Glyma.16G142100 hypothetical protein NA 12
Glyma.16G164300 hypothetical protein NA 12
Glyma.16G173600 hypothetical protein AT5G24030:SLAH3:SLAC1 homologue 3 12
Glyma.17G154000 hypothetical protein NA 12
Glyma.18G044000 hypothetical protein AT1G65920:AT1G65920:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 12
Glyma.18G048700 hypothetical protein NA 12