Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G206500 hypothetical protein NA 12
Glyma.14G211300 hypothetical protein AT3G03270:AT3G03270:Adenine nucleotide alpha hydrolases-like superfamily protein 12
Glyma.16G003500 GLYI-22 putative lactoylglutathione lyase NA 12
Glyma.16G053400 hypothetical protein AT3G27000:ARP2:actin related protein 2 12
Glyma.16G142100 hypothetical protein NA 12
Glyma.16G164300 hypothetical protein NA 12
Glyma.16G173600 hypothetical protein AT5G24030:SLAH3:SLAC1 homologue 3 12
Glyma.17G154000 hypothetical protein NA 12
Glyma.18G044000 hypothetical protein AT1G65920:AT1G65920:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 12
Glyma.18G048700 hypothetical protein NA 12