Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12304 Amrubicin 483.1476 484.1512 176
P17789 Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside) 872.2263 873.2325 176
P20561 669.1601 670.1662 176
P29540 Kadsuphilol L 606.2044 607.2073 176
P29563 Sulfocostunolide A 312.1036 313.1116 176
P29935 Acantrifoside A 942.5143 943.5248 176
P36283 Isopropyl dodecylfluorophosphonate 294.2113 295.2185 176
P38088 365.6483 366.6561 176
P00499 1-Pentanesulfonic acid 152.0504 153.0569 175
P32791 Tenuecyclamide A 460.0996 461.1056 175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 767
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 762
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 759
Glyma.16G118600 hypothetical protein NA 757
Glyma.04G116900 hypothetical protein NA 754
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 753
Glyma.07G021100 hypothetical protein NA 752
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 743
Glyma.14G071800 hypothetical protein NA 742
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 739