Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02752 Polanrazine B 377.1240 378.1297 180
P06961 Norhygrine 127.0981 128.1057 180
P10476 264.6079 265.6141 180
P10479 L-Arogenate 227.0795 228.0865 180
P12237 Siwanine A 505.2575 506.2645 180
P16337 Triphyllin A 656.2395 657.2469 180
P17370 Kosinostatin 616.2046 617.2161 180
P26964 688.2990 689.3077 180
P29279 Cyromazine 166.0980 167.1049 180
P30762 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 123.1160 180

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 767
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 762
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 759
Glyma.16G118600 hypothetical protein NA 757
Glyma.04G116900 hypothetical protein NA 754
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 753
Glyma.07G021100 hypothetical protein NA 752
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 743
Glyma.14G071800 hypothetical protein NA 742
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 739