Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P21750 Vismiaguianone E 428.1608 429.1691 106
P24821 ethyl 11Z-hexadecenoate 282.2559 283.2629 106
P28118 1022.3240 1023.3369 106
P28609 Methylsulfonyl 4-[(2-carbamimidoyl-3,4-dihydro-1H-isoquinolin-7-yl)oxymethyl]-1-pyridin-4-ylpiperidine-4-carboxylate 487.1867 488.1962 106
P29662 2,3-Dihydro-9-hydroxy-2-[1-(6-feruloyl)-beta-D-glucosyloxy-1-methylethyl]-7H-furo[3,2-g][1]benzopyran-7-one 600.1811 601.1892 106
P31521 Conodiparine F 736.3832 737.3898 106
P31941 9-chloro-10-hydroxy-octadecanoic acid 334.2284 335.2363 106
P32356 PA(a-15:0/5-iso PGF2VI) 704.4251 705.4351 106
P32718 A 75943 281.1621 282.1689 106
P35068 508.3543 509.3632 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 767
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 762
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 759
Glyma.16G118600 hypothetical protein NA 757
Glyma.04G116900 hypothetical protein NA 754
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 753
Glyma.07G021100 hypothetical protein NA 752
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 743
Glyma.14G071800 hypothetical protein NA 742
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 739