Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P25859 Zalypsis 709.2569 710.2650 110
P27893 Lucyoside J 810.4380 811.4434 110
P28885 Staphylopine 328.1394 329.1467 110
P29567 Lesopitron 320.1499 321.1569 110
P30547 Loratadine 382.1433 765.2943 110
P31925 Jubanine C 665.3694 666.3801 110
P33220 Arundin 440.2015 441.2109 110
P35526 Scammonin V 924.4930 925.5044 110
P39967 Trh-gly 420.1769 421.1838 110
P40736 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0977 155.1053 110

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 767
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 762
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 759
Glyma.16G118600 hypothetical protein NA 757
Glyma.04G116900 hypothetical protein NA 754
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 753
Glyma.07G021100 hypothetical protein NA 752
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 743
Glyma.14G071800 hypothetical protein NA 742
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 739