Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P42362 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.1878 607.1895 115
P43086 293.6759 294.6839 115
P46452 870.3660 871.3727 115
P49962 5-oxo-hexadecanoic acid 270.2172 271.2241 115
P50483 Deacetylmoxisylyte 237.1743 238.1820 115
P51262 Shizukaol L 648.2633 649.2721 115
P04030 Aurantiomide B 358.1659 359.1731 114
P04949 6'-Apiosyllotaustralin 393.1632 394.1668 114
P05751 6-(alpha-D-Glucosaminyl)-1-phosphatidyl-1D-myo-inositol 551.1353 552.1430 114
P05981 Dikegulac 274.1054 275.1114 114

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 767
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 762
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 759
Glyma.16G118600 hypothetical protein NA 757
Glyma.04G116900 hypothetical protein NA 754
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 753
Glyma.07G021100 hypothetical protein NA 752
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 743
Glyma.14G071800 hypothetical protein NA 742
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 739