Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26418 Antibiotic 273a1alpha 1112.3282 1113.3409 231
P30811 767.2566 768.2643 231
P04078 311.5769 312.5829 230
P14825 9R-hydroxy-2E,4E-decadienoic acid 184.1086 185.1164 230
P17592 175.1437 176.1505 230
P31714 4,4'-Dihydroxystilbene 212.0832 213.0898 230
P20017 343.2428 344.2506 229
P21903 Triptregeline H 611.2282 612.2377 229
P31991 Irroratin A 378.2030 379.2088 229
P26216 trans-2-Enoyl-OPC6-CoA 1013.2870 1014.2977 228

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G098900 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 12
Glyma.06G114700 hypothetical protein AT1G77510:PDIL1-2:PDI-like 1-2 12
Glyma.06G150700 hypothetical protein AT1G49180:AT1G49180:protein kinase family protein 12
Glyma.06G179700 hypothetical protein NA 12
Glyma.06G283800 hypothetical protein AT2G31110:AT2G31110:trichome birefringence-like protein (DUF828)__AT2G42570:TBL39:TRICHOME BIREFRINGENCE-LIKE 39 12
Glyma.06G313800 hypothetical protein AT4G22900:AT4G22900:transmembrane protein, putative (DUF1191) 12
Glyma.06G320000 hypothetical protein AT1G05740:AT1G05740:FAM136A-like protein (DUF842) 12
Glyma.06G320800 IF7GT6 isoflavone 7-O-glucosyltransferase UGT6 NA 12
Glyma.07G057600 hypothetical protein AT1G01430:TBL25:TRICHOME BIREFRINGENCE-LIKE 25 12
Glyma.07G058400 hypothetical protein AT3G25500:AFH1:formin homology 1 12