Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P38174 Azaspiracid 13 859.4835 860.4922 240
P40405 659.3981 660.4063 239
P00636 157.9538 158.9609 238
P12469 2,5-Dimethylfuran 96.0568 97.0643 238
P22595 Mucronulatol-(4->5')-vestitol 572.1981 573.2085 238
P38652 Mollicellin M 416.0708 417.0813 238
P14214 Decarbamoylgonyautoxin 1 368.0761 369.0806 237
P22578 583.1306 584.1392 237
P30643 Tetralin 132.0926 133.1001 237
P13409 706.1236 707.1314 236

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G098900 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 12
Glyma.06G114700 hypothetical protein AT1G77510:PDIL1-2:PDI-like 1-2 12
Glyma.06G150700 hypothetical protein AT1G49180:AT1G49180:protein kinase family protein 12
Glyma.06G179700 hypothetical protein NA 12
Glyma.06G283800 hypothetical protein AT2G31110:AT2G31110:trichome birefringence-like protein (DUF828)__AT2G42570:TBL39:TRICHOME BIREFRINGENCE-LIKE 39 12
Glyma.06G313800 hypothetical protein AT4G22900:AT4G22900:transmembrane protein, putative (DUF1191) 12
Glyma.06G320000 hypothetical protein AT1G05740:AT1G05740:FAM136A-like protein (DUF842) 12
Glyma.06G320800 IF7GT6 isoflavone 7-O-glucosyltransferase UGT6 NA 12
Glyma.07G057600 hypothetical protein AT1G01430:TBL25:TRICHOME BIREFRINGENCE-LIKE 25 12
Glyma.07G058400 hypothetical protein AT3G25500:AFH1:formin homology 1 12