Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55600 4-O-Demethylpenclomedine 308.8697 309.8759 —
P55602 24-homo-3alpha,7alpha,16alpha-trihydroxy-5beta-cholan-25-oic acid 422.3005 423.3085 —
P55603 Faleoconitine 689.3183 690.3285 —
P55604 128.9612 129.9688 —
P55605 113.9706 114.9777 —
P55606 134.9623 135.9696 —
P55607 Citranaxanthin 456.3418 457.3495 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G180200 hypothetical protein NA 12
Glyma.04G251000 hypothetical protein AT4G08290:UMAMIT20:nodulin MtN21 /EamA-like transporter family protein 12
Glyma.04G251900 hypothetical protein AT4G08250:AT4G08250:GRAS family transcription factor 12
Glyma.05G195400 hypothetical protein AT5G08740:NDC1:NAD(P)H dehydrogenase C1 12
Glyma.05G204600 hypothetical protein NA 12
Glyma.06G037800 hypothetical protein NA 12
Glyma.06G079500 hypothetical protein NA 12
Glyma.06G084200 hypothetical protein NA 12
Glyma.06G097800 hypothetical protein AT1G58230:AT1G58230:binding protein 12
Glyma.06G098800 hypothetical protein AT1G29060:AT1G29060:Target SNARE coiled-coil domain protein 12