Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P04038 | 273.6501 | 274.6556 | 262 | |
| P17302 | Candoxatrilat | 399.2291 | 400.2364 | 262 |
| P09522 | 1-Sinapoyl-2,2'-diferuloylgentiobiose | 900.2729 | 901.2756 | 259 |
| P39463 | 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one | 312.2143 | 313.2233 | 259 |
| P18970 | Deoxypumiloside | 496.1831 | 497.1903 | 257 |
| P30042 | 939.4715 | 940.4808 | 257 | |
| P49351 | 3,16'-Dihydroxy-beta,chi-caroten-4-one | 578.3786 | 579.3833 | 256 |
| P19113 | Lyngbyabellin E | 863.2426 | 864.2468 | 255 |
| P14677 | S-(9-hydroxy-PGA1)-glutathione | 645.3312 | 646.3359 | 254 |
| P42876 | Curassavioside D1 | 1020.5233 | 1021.5370 | 251 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.16G038900 | hypothetical protein | AT3G03790:AT3G03790:ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein | 13 | |
| Glyma.16G058800 | hypothetical protein | AT5G57890:AT5G57890:Glutamine amidotransferase type 1 family protein__AT1G25155:AT1G24909:Glutamine amidotransferase type 1 family protein__AT1G24909:AT1G24909:Glutamine amidotransferase type 1 family protein__AT1G25083:AT1G25083:Glutamine amidotransferase type 1 family protein__AT1G25220:ASB1:anthranilate synthase beta subunit 1__AT1G24807:AT1G24807:Glutamine amidotransferase type 1 family protein | 13 | |
| Glyma.16G159300 | hypothetical protein | NA | 13 | |
| Glyma.16G179000 | hypothetical protein | NA | 13 | |
| Glyma.16G205000 | hypothetical protein | AT5G62280:AT5G62280:DUF1442 family protein (DUF1442) | 13 | |
| Glyma.17G100700 | hypothetical protein | AT1G74470:AT1G74470:Pyridine nucleotide-disulfide oxidoreductase family protein | 13 | |
| Glyma.17G218000 | hypothetical protein | AT4G31890:AT4G31890:ARM repeat superfamily protein | 13 | |
| Glyma.18G025700 | hypothetical protein | AT3G11110:AT3G11110:RING/U-box superfamily protein | 13 | |
| Glyma.20G106200 | hypothetical protein | NA | 13 | |
| Glyma.20G220900 | GER12 | germin-like protein | AT5G39110:AT5G39110:RmlC-like cupins superfamily protein__AT5G39160:AT5G39160:RmlC-like cupins superfamily protein__AT5G39120:AT5G39120:RmlC-like cupins superfamily protein | 13 |