Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15114 831.2649 832.2732 290
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 767.4535 289
P43639 17-Methyloctadecasphinganine 315.3118 316.3193 287
P54549 Akuammine 382.1900 383.2001 286
P04966 Dihydroxytryptamine 192.0882 193.0951 285
P27837 433.2608 434.2695 282
P11278 27-O-Demethylrifamycin SV 683.3041 684.3108 279
P22499 Rosmadial 344.1593 689.3243 279
P08557 Dracorubin 488.1612 489.1703 278
P12127 Paulomycin F 702.1925 703.2042 274

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G303800 hypothetical protein NA 13
Glyma.14G035200 hypothetical protein AT5G19400:SMG7:Telomerase activating protein Est1 13
Glyma.14G073200 hypothetical protein NA 13
Glyma.14G076000 hypothetical protein AT5G42960:AT5G42960:outer envelope pore 24B-like protein 13
Glyma.14G172900 hypothetical protein NA 13
Glyma.14G191000 hypothetical protein AT2G29590:AT2G29590:Thioesterase superfamily protein 13
Glyma.14G206100 hypothetical protein AT2G30520:RPT2:Phototropic-responsive NPH3 family protein 13
Glyma.15G140200 hypothetical protein AT5G49460:ACLB-2:ATP citrate lyase subunit B 2 13
Glyma.15G149900 hypothetical protein NA 13
Glyma.15G150000 hypothetical protein AT4G15930:AT4G15930:Dynein light chain type 1 family protein 13