Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G290800 hypothetical protein AT2G20650:AT2G20650:RING/U-box superfamily protein__AT4G28370:AT4G28370:RING/U-box superfamily protein 13
Glyma.06G308900 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 13
Glyma.07G010400 hypothetical protein AT3G13750:BGAL1:beta galactosidase 1 13
Glyma.07G013800 hypothetical protein AT5G35790:G6PD1:glucose-6-phosphate dehydrogenase 1 13
Glyma.08G105500 hypothetical protein AT1G24260:SEP3:K-box region and MADS-box transcription factor family protein 13
Glyma.08G183400 hypothetical protein NA 13
Glyma.11G239100 hypothetical protein NA 13
Glyma.12G033700 hypothetical protein AT4G34830:MRL1:Pentatricopeptide repeat (PPR) superfamily protein 13
Glyma.13G160000 hypothetical protein AT3G42170:DAYSLEEPER:BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER 13
Glyma.13G198900 hypothetical protein NA 13