Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G290800 hypothetical protein AT2G20650:AT2G20650:RING/U-box superfamily protein__AT4G28370:AT4G28370:RING/U-box superfamily protein 13
Glyma.06G308900 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 13
Glyma.07G010400 hypothetical protein AT3G13750:BGAL1:beta galactosidase 1 13
Glyma.07G013800 hypothetical protein AT5G35790:G6PD1:glucose-6-phosphate dehydrogenase 1 13
Glyma.08G105500 hypothetical protein AT1G24260:SEP3:K-box region and MADS-box transcription factor family protein 13
Glyma.08G183400 hypothetical protein NA 13
Glyma.11G239100 hypothetical protein NA 13
Glyma.12G033700 hypothetical protein AT4G34830:MRL1:Pentatricopeptide repeat (PPR) superfamily protein 13
Glyma.13G160000 hypothetical protein AT3G42170:DAYSLEEPER:BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER 13
Glyma.13G198900 hypothetical protein NA 13