Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G084900 hypothetical protein NA 14
Glyma.20G085000 hypothetical protein NA 14
Glyma.20G085300 hypothetical protein AT2G33360:AT2G33360:cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527) 14
Glyma.20G085400 hypothetical protein NA 14
Glyma.20G114300 hypothetical protein AT3G25840:AT3G25840:Protein kinase superfamily protein 14
Glyma.01G093200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 13
Glyma.01G094200 hypothetical protein AT3G60240:EIF4G:eukaryotic translation initiation factor 4G 13
Glyma.01G097200 hypothetical protein NA 13
Glyma.02G278000 hypothetical protein NA 13
Glyma.02G292200 hypothetical protein AT3G20475:MSH5:MUTS-homologue 5 13