Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55501 TRIETHYLENE GLYCOL 150.0886 151.0965 —
P55504 242.8763 243.8834 —
P55505 278.8958 279.9028 —
P55506 Cycloaspeptide D 627.2976 628.3046 —
P55509 Insularine 2beta-N-oxide 636.2833 637.2873 —
P55518 116.9519 117.9590 —
P55519 4-Chloro-7-nitrobenzofurazan 198.9770 199.9844 —
P55520 236.8846 237.8918 —
P55521 Lupinine 169.1454 170.1523 —
P55523 Cefapime 462.1075 463.1113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G084900 hypothetical protein NA 14
Glyma.20G085000 hypothetical protein NA 14
Glyma.20G085300 hypothetical protein AT2G33360:AT2G33360:cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527) 14
Glyma.20G085400 hypothetical protein NA 14
Glyma.20G114300 hypothetical protein AT3G25840:AT3G25840:Protein kinase superfamily protein 14
Glyma.01G093200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 13
Glyma.01G094200 hypothetical protein AT3G60240:EIF4G:eukaryotic translation initiation factor 4G 13
Glyma.01G097200 hypothetical protein NA 13
Glyma.02G278000 hypothetical protein NA 13
Glyma.02G292200 hypothetical protein AT3G20475:MSH5:MUTS-homologue 5 13