Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20244 (+)-Trehazolin 366.1291 367.1369 140
P22618 (Z)-3-Hexenyl 3-methylbutanoate 184.1453 185.1523 140
P26724 Arginylthreonine 275.1606 276.1676 140
P28637 630.7857 631.7925 140
P32826 Aszonalenin 373.1797 374.1870 140
P33750 6,8-Epoxy-p-menthane 154.1356 155.1413 140
P34054 Scandenolide 334.1041 335.1106 140
P35584 Maetenoside B 1202.5971 1203.6044 140
P44811 Fargoside D 778.4074 779.4157 140
P46204 SB 311009 408.2576 409.2666 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 795
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 794
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 783
Glyma.05G219200 hypothetical protein NA 782
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 782
Glyma.01G124100 hypothetical protein NA 781
Glyma.05G149900 hypothetical protein NA 781
Glyma.16G020200 hypothetical protein NA 774
Glyma.16G118200 hypothetical protein NA 773
Glyma.16G147000 hypothetical protein NA 771