Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09654 2-Hydroxyfelbamate 254.0901 255.0955 141
P16359 197.1097 198.1162 141
P17680 Glycosmisic acid 372.1197 373.1259 141
P21082 (2S)-2-Amino-4-sulfanylbutanal 119.0422 120.0490 141
P26911 1-(9Z-octadecenoyl)-2-(4,7-dioxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-myo-inositol) 736.3391 737.3480 141
P27176 FD 212 268.1287 269.1370 141
P27832 Mabiogenin 3-[rhamnosyl-(1->6)-glucoside] 796.4504 797.4579 141
P29828 4'-Oxonebramine 304.1730 305.1785 141
P32281 Aristolindiquinone 218.0561 219.0635 141
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 219.1361 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 795
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 794
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 783
Glyma.05G219200 hypothetical protein NA 782
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 782
Glyma.01G124100 hypothetical protein NA 781
Glyma.05G149900 hypothetical protein NA 781
Glyma.16G020200 hypothetical protein NA 774
Glyma.16G118200 hypothetical protein NA 773
Glyma.16G147000 hypothetical protein NA 771