Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23907 968.2928 969.3031 132
P26825 850.3598 851.3632 132
P30950 14-Hydroxycathovaline 442.2134 443.2199 132
P33509 2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate 250.0469 251.0549 132
P34626 Microtoenin C 941.5073 942.5094 132
P55525 271.1993 272.2052 132
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 293.0816 131
P06579 4-O-Methylascochlorin 418.1920 419.1981 131
P07063 Suffruticoside E 622.2095 623.2178 131
P08863 428.0566 429.0641 131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 795
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 794
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 783
Glyma.05G219200 hypothetical protein NA 782
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 782
Glyma.01G124100 hypothetical protein NA 781
Glyma.05G149900 hypothetical protein NA 781
Glyma.16G020200 hypothetical protein NA 774
Glyma.16G118200 hypothetical protein NA 773
Glyma.16G147000 hypothetical protein NA 771