Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G005900 Phosphoenolpyruvate/phosphate translocator 2, chloroplastic AT3G01550:PPT2:phosphoenolpyruvate (pep)/phosphate translocator 2 14
Glyma.19G191000 hypothetical protein NA 14
Glyma.19G224700 hypothetical protein NA 14
Glyma.20G055400 hypothetical protein NA 14
Glyma.20G056500 hypothetical protein AT1G35220:AT1G35220:FAM91 carboxy-terminus protein 14
Glyma.20G056800 hypothetical protein AT2G32970:AT2G32970:G1/S-specific cyclin-E protein 14
Glyma.20G057300 hypothetical protein NA 14
Glyma.20G057500 hypothetical protein NA 14
Glyma.20G058000 hypothetical protein AT1G76490:HMG1:hydroxy methylglutaryl CoA reductase 1 14
Glyma.20G059300 hypothetical protein NA 14