Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G203000 hypothetical protein AT2G30360:SIP4:SOS3-interacting protein 4 14
Glyma.15G019700 hypothetical protein AT3G21360:AT3G21360:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 14
Glyma.15G019800 hypothetical protein AT1G51940:LYK3:protein kinase family protein / peptidoglycan-binding LysM domain-containing protein 14
Glyma.15G021700 hypothetical protein NA 14
Glyma.15G218000 hypothetical protein NA 14
Glyma.16G148400 hypothetical protein AT2G45710:AT2G45710:Zinc-binding ribosomal protein family protein 14
Glyma.17G203300 hypothetical protein NA 14
Glyma.18G214500 hypothetical protein NA 14
Glyma.18G267200 hypothetical protein NA 14
Glyma.18G272100 hypothetical protein AT5G15630:IRX6:COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 14