Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41899 Cycloshizukaol A 548.2461 549.2553 219
P49571 Olopatadine n-oxide 353.1566 354.1633 219
P03782 Kikumycin B 317.1599 318.1657 218
P08166 742.1240 743.1314 218
P20028 beta-D-Glucopyranosyl anthranilate 299.1011 300.1073 218
P22124 392.6469 393.6511 218
P27938 Peneciraistin C 398.1535 399.1601 218
P36141 3b-Hydroxy-6b-(3-chloro-2-hydroxy-2-methylbutanoyloxy)-7(11)-eremophilen-12,8b-olide 400.1684 401.1770 218
P36494 5-Hydroxy-1-methylpyrrolidin-2-one 115.0624 116.0694 218
P45909 222.1575 223.1662 218

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G203000 hypothetical protein AT2G30360:SIP4:SOS3-interacting protein 4 14
Glyma.15G019700 hypothetical protein AT3G21360:AT3G21360:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 14
Glyma.15G019800 hypothetical protein AT1G51940:LYK3:protein kinase family protein / peptidoglycan-binding LysM domain-containing protein 14
Glyma.15G021700 hypothetical protein NA 14
Glyma.15G218000 hypothetical protein NA 14
Glyma.16G148400 hypothetical protein AT2G45710:AT2G45710:Zinc-binding ribosomal protein family protein 14
Glyma.17G203300 hypothetical protein NA 14
Glyma.18G214500 hypothetical protein NA 14
Glyma.18G267200 hypothetical protein NA 14
Glyma.18G272100 hypothetical protein AT5G15630:IRX6:COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 14