Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G058200 PAL2.1 phenylalanine ammonia-lyase 2.1 AT3G53260:PAL2:phenylalanine ammonia-lyase 2__AT2G37040:PAL1:PHE ammonia lyase 1 14
Glyma.10G172400 hypothetical protein AT4G10570:UBP9:ubiquitin-specific protease 9__AT1G32850:UBP11:ubiquitin-specific protease 11 14
Glyma.10G194900 hypothetical protein NA 14
Glyma.10G212400 hypothetical protein AT3G12090:TET6:tetraspanin6 14
Glyma.11G109400 hypothetical protein AT4G28510:PHB1:prohibitin 1 14
Glyma.11G109500 hypothetical protein NA 14
Glyma.11G126800 hypothetical protein AT1G06050:AT1G06050:ENHANCED DISEASE RESISTANCE-like protein (DUF1336) 14
Glyma.12G014800 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 14
Glyma.12G031300 hypothetical protein AT2G16660:AT2G16660:Major facilitator superfamily protein 14
Glyma.14G017600 hypothetical protein AT5G55280:FTSZ1-1:homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 14