Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G058200 PAL2.1 phenylalanine ammonia-lyase 2.1 AT3G53260:PAL2:phenylalanine ammonia-lyase 2__AT2G37040:PAL1:PHE ammonia lyase 1 14
Glyma.10G172400 hypothetical protein AT4G10570:UBP9:ubiquitin-specific protease 9__AT1G32850:UBP11:ubiquitin-specific protease 11 14
Glyma.10G194900 hypothetical protein NA 14
Glyma.10G212400 hypothetical protein AT3G12090:TET6:tetraspanin6 14
Glyma.11G109400 hypothetical protein AT4G28510:PHB1:prohibitin 1 14
Glyma.11G109500 hypothetical protein NA 14
Glyma.11G126800 hypothetical protein AT1G06050:AT1G06050:ENHANCED DISEASE RESISTANCE-like protein (DUF1336) 14
Glyma.12G014800 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 14
Glyma.12G031300 hypothetical protein AT2G16660:AT2G16660:Major facilitator superfamily protein 14
Glyma.14G017600 hypothetical protein AT5G55280:FTSZ1-1:homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 14