Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G116300 P34 NA 14
Glyma.08G147900 hypothetical protein AT5G09760:AT5G09760:Plant invertase/pectin methylesterase inhibitor superfamily 14
Glyma.08G236300 hypothetical protein NA 14
Glyma.08G236400 hypothetical protein AT1G56050:AT1G56050:GTP-binding protein-like protein 14
Glyma.08G236700 hypothetical protein AT1G79090:AT1G79090:topoisomerase II-associated protein 14
Glyma.08G236800 Conserved telomere maintenance component 1 AT4G09680:CTC1:conserved telomere maintenance component 1 14
Glyma.08G237200 hypothetical protein AT1G79570:AT1G79570:kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein 14
Glyma.08G237500 AT1G79560 protein AT1G79560:FTSH12:FTSH protease 12 14
Glyma.08G237800 hypothetical protein NA 14
Glyma.08G238100 hypothetical protein NA 14