Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G123500 hypothetical protein AT1G32750:HAF01:HAC13 protein (HAC13) 14
Glyma.04G181000 hypothetical protein AT3G48010:CNGC16:cyclic nucleotide-gated channel 16 14
Glyma.04G182500 hypothetical protein NA 14
Glyma.04G252800 hypothetical protein AT2G17900:SDG37:SET domain group 37 14
Glyma.05G124100 hypothetical protein AT5G44450:AT5G44450:alpha amino-terminal protein methyltransferase 14
Glyma.05G148800 hypothetical protein AT1G24260:SEP3:K-box region and MADS-box transcription factor family protein 14
Glyma.07G059300 hypothetical protein AT2G39780:RNS2:ribonuclease 2 14
Glyma.07G073400 hypothetical protein AT2G45830:DTA2:downstream target of AGL15 2 14
Glyma.07G077700 hypothetical protein NA 14
Glyma.07G129700 hypothetical protein AT4G29680:AT4G29680:Alkaline-phosphatase-like family protein 14