Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09497 2,5-Dimethylfuran 96.0575 97.0642 193
P10553 299.1808 300.1868 193
P18019 AH 135Y 291.1104 292.1177 193
P29144 2-Hexyl-5-methyl-3(2H)-furanone 182.1294 183.1365 193
P37333 Xanthobaccin C 494.2826 495.2901 193
P40190 Tasumatrol F 632.2808 633.2882 193
P40307 Dolaconine 419.2601 420.2671 193
P00145 Limonenecarboxylic acid 180.1121 181.1181 192
P01028 Lamiridosin A 260.0890 261.0946 192
P03908 438.5879 439.5923 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G123500 hypothetical protein AT1G32750:HAF01:HAC13 protein (HAC13) 14
Glyma.04G181000 hypothetical protein AT3G48010:CNGC16:cyclic nucleotide-gated channel 16 14
Glyma.04G182500 hypothetical protein NA 14
Glyma.04G252800 hypothetical protein AT2G17900:SDG37:SET domain group 37 14
Glyma.05G124100 hypothetical protein AT5G44450:AT5G44450:alpha amino-terminal protein methyltransferase 14
Glyma.05G148800 hypothetical protein AT1G24260:SEP3:K-box region and MADS-box transcription factor family protein 14
Glyma.07G059300 hypothetical protein AT2G39780:RNS2:ribonuclease 2 14
Glyma.07G073400 hypothetical protein AT2G45830:DTA2:downstream target of AGL15 2 14
Glyma.07G077700 hypothetical protein NA 14
Glyma.07G129700 hypothetical protein AT4G29680:AT4G29680:Alkaline-phosphatase-like family protein 14