Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15527 (1S,4R)-passicapsin 417.1645 418.1754 214
P17647 Quercetin 3-sambubioside-7-glucoside 758.1981 759.2019 214
P04012 N2,N5-Diacetylornithine 216.1093 217.1155 213
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 713.1566 212
P48613 Emorfazone 239.1270 240.1348 212
P06958 Adafosbuvir 545.1626 546.1675 211
P12657 4,4'-Stilbenedicarboxamidine dihydrochloride 264.1403 265.1498 211
P22693 Propanoic acid, 3-((((2-(1,1-dimethylethyl)-5-methoxy-6-benzothiazolyl)amino)thioxomethyl)thio)- 384.0657 385.0746 211
P34892 Aristolin 629.2974 630.3072 211
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 749.4768 211

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G123500 hypothetical protein AT1G32750:HAF01:HAC13 protein (HAC13) 14
Glyma.04G181000 hypothetical protein AT3G48010:CNGC16:cyclic nucleotide-gated channel 16 14
Glyma.04G182500 hypothetical protein NA 14
Glyma.04G252800 hypothetical protein AT2G17900:SDG37:SET domain group 37 14
Glyma.05G124100 hypothetical protein AT5G44450:AT5G44450:alpha amino-terminal protein methyltransferase 14
Glyma.05G148800 hypothetical protein AT1G24260:SEP3:K-box region and MADS-box transcription factor family protein 14
Glyma.07G059300 hypothetical protein AT2G39780:RNS2:ribonuclease 2 14
Glyma.07G073400 hypothetical protein AT2G45830:DTA2:downstream target of AGL15 2 14
Glyma.07G077700 hypothetical protein NA 14
Glyma.07G129700 hypothetical protein AT4G29680:AT4G29680:Alkaline-phosphatase-like family protein 14