Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G237600 hypothetical protein NA 15
Glyma.01G091100 hypothetical protein AT3G25620:ABCG21:ABC-2 type transporter family protein 14
Glyma.01G092800 hypothetical protein NA 14
Glyma.01G093900 hypothetical protein NA 14
Glyma.01G094800 hypothetical protein NA 14
Glyma.01G097400 hypothetical protein AT4G37870:PCK1:phosphoenolpyruvate carboxykinase 1 14
Glyma.01G165600 hypothetical protein NA 14
Glyma.02G115700 hypothetical protein AT1G26500:AT1G26500:Pentatricopeptide repeat (PPR) superfamily protein 14
Glyma.02G203100 hypothetical protein AT5G58000:AT5G58000:Reticulon family protein 14
Glyma.03G020900 hypothetical protein AT3G18030:HAL3A:HAL3-like protein A 14