Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G237600 hypothetical protein NA 15
Glyma.01G091100 hypothetical protein AT3G25620:ABCG21:ABC-2 type transporter family protein 14
Glyma.01G092800 hypothetical protein NA 14
Glyma.01G093900 hypothetical protein NA 14
Glyma.01G094800 hypothetical protein NA 14
Glyma.01G097400 hypothetical protein AT4G37870:PCK1:phosphoenolpyruvate carboxykinase 1 14
Glyma.01G165600 hypothetical protein NA 14
Glyma.02G115700 hypothetical protein AT1G26500:AT1G26500:Pentatricopeptide repeat (PPR) superfamily protein 14
Glyma.02G203100 hypothetical protein AT5G58000:AT5G58000:Reticulon family protein 14
Glyma.03G020900 hypothetical protein AT3G18030:HAL3A:HAL3-like protein A 14