Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G190800 hypothetical protein NA 15
Glyma.15G036000 hypothetical protein NA 15
Glyma.15G069700 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 15
Glyma.15G217300 hypothetical protein AT3G12710:AT3G12710:DNA glycosylase superfamily protein 15
Glyma.16G015300 hypothetical protein NA 15
Glyma.16G042700 hypothetical protein AT1G08570:ACHT4:atypical CYS HIS rich thioredoxin 4 15
Glyma.16G153800 hypothetical protein AT5G18110:NCBP:Putative cap-binding protein 15
Glyma.16G173100 hypothetical protein AT5G52920:PKP-BETA1:plastidic pyruvate kinase beta subunit 1 15
Glyma.16G176900 hypothetical protein NA 15
Glyma.16G177000 hypothetical protein NA 15