Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55446 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2571 391.2651 —
P55448 Myrrhanol A 460.3838 461.3899 —
P55449 1-(3,4-Dichlorophenyl)urea 203.9825 204.9901 —
P55452 Flunixin 296.0745 297.0820 —
P55455 557.1670 558.1718 —
P55456 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1027 503.1103 —
P55458 Rosmadial 344.1611 345.1687 —
P55459 7-Methyl-6,8-bis(methylthio)pyrrolo(1,2-a)pyrazine 224.0408 225.0488 —
P55460 Propyl 1-(propylsulfinyl)propyl disulfide 240.0673 241.0731 —
P55461 Losmapimod 383.1986 384.2078 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G190800 hypothetical protein NA 15
Glyma.15G036000 hypothetical protein NA 15
Glyma.15G069700 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 15
Glyma.15G217300 hypothetical protein AT3G12710:AT3G12710:DNA glycosylase superfamily protein 15
Glyma.16G015300 hypothetical protein NA 15
Glyma.16G042700 hypothetical protein AT1G08570:ACHT4:atypical CYS HIS rich thioredoxin 4 15
Glyma.16G153800 hypothetical protein AT5G18110:NCBP:Putative cap-binding protein 15
Glyma.16G173100 hypothetical protein AT5G52920:PKP-BETA1:plastidic pyruvate kinase beta subunit 1 15
Glyma.16G176900 hypothetical protein NA 15
Glyma.16G177000 hypothetical protein NA 15