Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23451 607.2766 608.2820 221
P05770 1-Methylpiperidin-4-yl butanoate 185.1403 186.1473 220
P09835 10-Formyldihydrofolate 471.1494 472.1544 220
P10595 317.1915 318.1977 220
P12478 5,7-octadienoic acid 140.0839 141.0905 220
P19868 Cohaerin C 482.2267 483.2355 220
P30782 Cryptostigmin IV 1030.4967 1031.5022 220
P40362 BL V 424.0812 425.0898 220
P44001 839.4221 840.4307 220
P05350 Methylinoscavin B 450.1344 451.1421 219

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G190800 hypothetical protein NA 15
Glyma.15G036000 hypothetical protein NA 15
Glyma.15G069700 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 15
Glyma.15G217300 hypothetical protein AT3G12710:AT3G12710:DNA glycosylase superfamily protein 15
Glyma.16G015300 hypothetical protein NA 15
Glyma.16G042700 hypothetical protein AT1G08570:ACHT4:atypical CYS HIS rich thioredoxin 4 15
Glyma.16G153800 hypothetical protein AT5G18110:NCBP:Putative cap-binding protein 15
Glyma.16G173100 hypothetical protein AT5G52920:PKP-BETA1:plastidic pyruvate kinase beta subunit 1 15
Glyma.16G176900 hypothetical protein NA 15
Glyma.16G177000 hypothetical protein NA 15