Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55161 1-dimethylarsinoyl-decane 262.1259 263.1321 —
P55163 2-Propylphenol 136.0890 409.2738 —
P55165 601.4141 602.4200 —
P55167 17-(4-Hydroxyphenyl)heptadecanoyl adenylate 691.3377 692.3438 —
P55169 265.2467 266.2533 —
P55170 12R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 503.2855 504.2909 —
P55171 Phyllanthusmin C 512.1315 513.1352 —
P55175 Aspergilone A 386.1888 387.1962 —
P55176 2-Benzyl-aminoethanol 151.0991 454.3046 —
P55179 Chatferin 336.2268 337.2331 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G224500 hypothetical protein NA 836
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 836
Glyma.16G115400 hypothetical protein NA 833
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 829
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 821
Glyma.11G095100 hypothetical protein NA 821
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 817
Glyma.09G249500 hypothetical protein NA 815
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 802
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 800