Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G047100 hypothetical protein AT3G51740:IMK2:inflorescence meristem receptor-like kinase 2 15
Glyma.04G096200 hypothetical protein AT4G24470:ZIM:GATA-type zinc finger protein with TIFY domain-containing protein 15
Glyma.04G098900 hypothetical protein AT4G09020:ISA3:isoamylase 3 15
Glyma.04G252700 hypothetical protein AT1G77720:PPK1:putative protein kinase 1 15
Glyma.05G164800 hypothetical protein NA 15
Glyma.06G113100 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 15
Glyma.06G113300 hypothetical protein AT1G21810:AT1G21810:filament-like protein (DUF869) 15
Glyma.06G289300 hypothetical protein AT2G20570:GPRI1:GBF's pro-rich region-interacting factor 1 15
Glyma.06G290600 hypothetical protein AT4G28390:AAC3:ADP/ATP carrier 3 15
Glyma.07G083400 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2 15