Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G047100 hypothetical protein AT3G51740:IMK2:inflorescence meristem receptor-like kinase 2 15
Glyma.04G096200 hypothetical protein AT4G24470:ZIM:GATA-type zinc finger protein with TIFY domain-containing protein 15
Glyma.04G098900 hypothetical protein AT4G09020:ISA3:isoamylase 3 15
Glyma.04G252700 hypothetical protein AT1G77720:PPK1:putative protein kinase 1 15
Glyma.05G164800 hypothetical protein NA 15
Glyma.06G113100 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 15
Glyma.06G113300 hypothetical protein AT1G21810:AT1G21810:filament-like protein (DUF869) 15
Glyma.06G289300 hypothetical protein AT2G20570:GPRI1:GBF's pro-rich region-interacting factor 1 15
Glyma.06G290600 hypothetical protein AT4G28390:AAC3:ADP/ATP carrier 3 15
Glyma.07G083400 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2 15