Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P17402 Stenopalustroside E 966.2688 967.2721 340
P22371 352.6573 353.6630 314
P13413 (4-Ethylnaphthalen-1-yl)[1-(5-fluoropentyl)-1H-indol-3-yl]methanone 387.2022 388.2077 311
P13744 Mutangin 636.2571 637.2635 310
P40835 Gnidicin-20-palmitate 866.4613 867.4696 309
P42556 Arboreaside B 1104.5548 1105.5612 304
P16221 Ganomastenol C 254.1849 255.1926 299
P15142 521.2481 522.2554 297
P34561 818.1767 819.1780 295
P00008 281.8737 282.8810 292

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G027900 hypothetical protein AT5G15450:CLPB3:casein lytic proteinase B3 16
Glyma.19G201800 hypothetical protein NA 16
Glyma.20G004900 Probable xyloglucan galactosyltransferase GT17 AT1G68470:AT1G68470:Exostosin family protein 16
Glyma.20G053700 hypothetical protein NA 16
Glyma.20G123500 hypothetical protein NA 16
Glyma.20G198600 hypothetical protein AT5G51150:AT5G51150:Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 16
Glyma.20G221200 hypothetical protein NA 16
Glyma.01G091600 hypothetical protein NA 15
Glyma.01G167600 hypothetical protein AT5G66290:AT5G66290:uncharacterized protein 15
Glyma.02G031400 hypothetical protein NA 15