Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G177200 hypothetical protein AT4G09010:TL29:ascorbate peroxidase 4 16
Glyma.15G224200 hypothetical protein NA 16
Glyma.16G003100 hypothetical protein AT1G09800:AT1G09800:Pseudouridine synthase family protein 16
Glyma.16G040200 hypothetical protein AT3G03860:APRL5:APR-like 5 16
Glyma.18G045500 hypothetical protein NA 16
Glyma.18G065700 hypothetical protein AT2G29630:THIC:thiaminC 16
Glyma.18G220900 hypothetical protein AT4G00200:AT4G00200:AT hook motif DNA-binding family protein 16
Glyma.18G240600 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 16
Glyma.18G263200 hypothetical protein NA 16
Glyma.18G273500 hypothetical protein AT5G15800:SEP1:K-box region and MADS-box transcription factor family protein 16