Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G177200 hypothetical protein AT4G09010:TL29:ascorbate peroxidase 4 16
Glyma.15G224200 hypothetical protein NA 16
Glyma.16G003100 hypothetical protein AT1G09800:AT1G09800:Pseudouridine synthase family protein 16
Glyma.16G040200 hypothetical protein AT3G03860:APRL5:APR-like 5 16
Glyma.18G045500 hypothetical protein NA 16
Glyma.18G065700 hypothetical protein AT2G29630:THIC:thiaminC 16
Glyma.18G220900 hypothetical protein AT4G00200:AT4G00200:AT hook motif DNA-binding family protein 16
Glyma.18G240600 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 16
Glyma.18G263200 hypothetical protein NA 16
Glyma.18G273500 hypothetical protein AT5G15800:SEP1:K-box region and MADS-box transcription factor family protein 16