Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G300800 hypothetical protein AT1G14270:AT1G14270:CAAX amino terminal protease family protein 16
Glyma.08G338700 hypothetical protein NA 16
Glyma.10G005300 hypothetical protein AT5G46050:PTR3:peptide transporter 3 16
Glyma.10G006000 hypothetical protein NA 16
Glyma.10G006500 hypothetical protein AT5G43330:c-NAD-MDH2:Lactate/malate dehydrogenase family protein 16
Glyma.11G019200 hypothetical protein AT4G23730:AT4G23730:Galactose mutarotase-like superfamily protein 16
Glyma.12G194000 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 16
Glyma.13G223900 hypothetical protein AT1G29690:CAD1:MAC/Perforin domain-containing protein 16
Glyma.14G087700 hypothetical protein NA 16
Glyma.14G132000 hypothetical protein AT4G31115:AT4G31115:DUF1997 family protein, putative (DUF1997) 16