Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P18070 Cymbidine A 949.4154 950.4239 236
P25621 Pseudoanisatin 298.1384 299.1467 236
P47300 534.7868 535.7927 236
P31222 Sufotidine 421.2096 422.2177 235
P03976 Dilmapimod 456.1404 457.1517 234
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 227.1285 234
P05631 Trimethyl orthoacetate 120.0775 121.0848 233
P13790 317.1926 318.1997 233
P23295 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0800 414.0838 233
P11101 L-beta-aspartyl-L-phenylalanine 280.1044 281.1122 231

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G090100 hypothetical protein NA 16
Glyma.06G090200 hypothetical protein NA 16
Glyma.06G090300 hypothetical protein AT1G09980:AT1G09980:Putative serine esterase family protein__AT1G58350:ZW18:Putative serine esterase family protein 16
Glyma.06G090400 hypothetical protein AT5G49650:XK-2:xylulose kinase-2 16
Glyma.06G204800 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 16
Glyma.06G207100 hypothetical protein AT1G73990:SPPA:signal peptide peptidase 16
Glyma.08G146000 hypothetical protein AT5G09850:AT5G09850:Transcription elongation factor (TFIIS) family protein 16
Glyma.08G207300 hypothetical protein NA 16
Glyma.08G207400 hypothetical protein AT1G80000:AT1G80000:CASC3/Barentsz eIF4AIII binding protein 16
Glyma.08G207500 hypothetical protein NA 16