Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G246100 hypothetical protein NA 17
Glyma.20G038200 hypothetical protein NA 17
Glyma.20G150300 hypothetical protein AT3G22830:HSFA6B:heat shock transcription factor A6B 17
Glyma.20G150500 hypothetical protein AT1G04200:AT1G04200:dyggve-melchior-clausen syndrome protein 17
Glyma.20G237300 hypothetical protein AT5G27830:AT5G27830:folate receptor family protein 17
Glyma.02G109700 hypothetical protein NA 16
Glyma.03G204100 hypothetical protein AT2G35890:CPK25:calcium-dependent protein kinase 25 16
Glyma.04G103500 hypothetical protein AT1G78110:AT1G78110:nucleolar GTP-binding protein 16
Glyma.04G162500 hypothetical protein NA 16
Glyma.04G176600 hypothetical protein AT1G74800:AT1G74800:Galactosyltransferase family protein 16