Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G052900 hypothetical protein NA 17
Glyma.19G053000 hypothetical protein NA 17
Glyma.19G053200 hypothetical protein AT5G45910:AT5G45910:GDSL-like Lipase/Acylhydrolase superfamily protein 17
Glyma.19G060900 hypothetical protein NA 17
Glyma.19G062200 hypothetical protein NA 17
Glyma.19G066600 hypothetical protein NA 17
Glyma.19G066800 hypothetical protein AT5G53430:SDG29:SET domain group 29 17
Glyma.19G070700 hypothetical protein AT1G70790:AT1G70790:Calcium-dependent lipid-binding (CaLB domain) family protein 17
Glyma.19G073200 hypothetical protein AT1G25390:AT1G25390:Protein kinase superfamily protein 17
Glyma.19G102100 hypothetical protein AT3G02020:AK3:aspartate kinase 3 17