Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G181100 hypothetical protein NA 17
Glyma.16G213300 hypothetical protein AT1G34130:STT3B:staurosporin and temperature sensitive 3-like b 17
Glyma.17G110000 hypothetical protein AT3G42180:AT3G42180:Exostosin family protein 17
Glyma.17G145900 hypothetical protein AT4G16820:PLA-I{beta]2:alpha/beta-Hydrolases superfamily protein 17
Glyma.18G045100 hypothetical protein AT1G65840:PAO4:polyamine oxidase 4 17
Glyma.18G213900 hypothetical protein AT3G08740:AT3G08740:elongation factor P (EF-P) family protein 17
Glyma.18G228300 hypothetical protein AT1G01920:AT1G01920:SET domain-containing protein 17
Glyma.18G228400 hypothetical protein AT5G35730:AT5G35730:EXS (ERD1/XPR1/SYG1) family protein 17
Glyma.18G237700 hypothetical protein AT4G01280:AT4G01280:Homeodomain-like superfamily protein 17
Glyma.18G274000 hypothetical protein AT5G38895:AT5G38895:RING/U-box superfamily protein 17