Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24140 Aristolindiquinone 218.0573 219.0638 183
P29594 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1242 427.1313 183
P36026 O-Phosphoviomycin 765.2885 766.2977 183
P37799 4-pregnene-17alpha,20beta,21-triol-3,11-dione 362.2054 363.2127 183
P38116 Leuphasyl 569.2841 570.2907 183
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 556.2481 183
P44241 Avermectin A2a monosaccharide 760.4380 761.4431 183
P46117 (S)-3-(6-Methoxypyridin-3-yl)-3-(2-oxo-3-(3-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)propyl)imidazolidin-1-yl)propanoic acid 439.2225 440.2339 183
P46875 2-Ethylhexyl 4-(dimethylamino)benzoate 277.2077 278.2165 183
P00749 4(3H)-Quinazolinone, 2-ethyl-3-(o-tolyl)- 264.1257 265.1335 182

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G181100 hypothetical protein NA 17
Glyma.16G213300 hypothetical protein AT1G34130:STT3B:staurosporin and temperature sensitive 3-like b 17
Glyma.17G110000 hypothetical protein AT3G42180:AT3G42180:Exostosin family protein 17
Glyma.17G145900 hypothetical protein AT4G16820:PLA-I{beta]2:alpha/beta-Hydrolases superfamily protein 17
Glyma.18G045100 hypothetical protein AT1G65840:PAO4:polyamine oxidase 4 17
Glyma.18G213900 hypothetical protein AT3G08740:AT3G08740:elongation factor P (EF-P) family protein 17
Glyma.18G228300 hypothetical protein AT1G01920:AT1G01920:SET domain-containing protein 17
Glyma.18G228400 hypothetical protein AT5G35730:AT5G35730:EXS (ERD1/XPR1/SYG1) family protein 17
Glyma.18G237700 hypothetical protein AT4G01280:AT4G01280:Homeodomain-like superfamily protein 17
Glyma.18G274000 hypothetical protein AT5G38895:AT5G38895:RING/U-box superfamily protein 17